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Lead Optimization

Lead optimization is the complex, non-linear process of refining the chemical structure of a confirmed hit to improve its drug characteristics with the goal of producing a pre-clinical drug
candidate. This stage frequently represents the bottleneck of a drug discovery program. Lead optimization employs a combination of empirical, combinatorial, and rational approaches. Criteria to confidently associate a candidate’s target and in vitro profile to its cellular or in vivo profile:

  1. High potency: Demonstrates activity at low concentrations against the selected target. Typical in vitro potency is 1-100 nM
  2. Selectivity: Preferentially acts on the target of interest relative to other protein targets
  3. Activity in cellular, tissue or in vivo setting: 100 nM – 1 mM
  4. Toxicity: Tolerated in animal models

Lead optimization figure
 
Feeding materials properties into the evaluation scheme for potency, selectivity and appropriate absorption, distribution, metabolism and excretion (ADME) properties enhances the ability to optimize a lead compound.

Image source: Gardner CR, Walsh CT, Almarsson Ö. Drugs as materials: Valuing physical form in drug discovery. Nature Reviews Drug Discovery. 2004 Nov;3(11):926-34.